covid 19 image classification covid 19 image classification

Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. Chong et al.8 proposed an FS model, called Robustness-Driven FS (RDFS) to select futures from lung CT images to classify the patterns of fibrotic interstitial lung diseases. Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. (9) as follows. Although convolutional neural networks (CNNs) is considered the current state-of-the-art image classification technique, it needs massive computational cost for deployment and training. IEEE Trans. In addition, up to our knowledge, MPA has not applied to any real applications yet. While no feature selection was applied to select best features or to reduce model complexity. implemented the deep neural networks and classification as well as prepared the related figures and manuscript text. Biol. Inspired by this concept, Faramarzi et al.37 developed the MPA algorithm by considering both of a predator a prey as solutions. Google Scholar. 9, 674 (2020). layers is to extract features from input images. Artif. Inspired by our recent work38, where VGG-19 besides statistically enhanced Salp Swarm Algorithm was applied to select the best features for White Blood Cell Leukaemia classification. Slider with three articles shown per slide. Since its structure consists of some parallel paths, all the paths use padding of 1 pixel to preserve the same height & width for the inputs and the outputs. Initialize solutions for the prey and predator. 132, 8198 (2018). Future Gener. Moreover, we design a weighted supervised loss that assigns higher weight for . Finally, the predator follows the levy flight distribution to exploit its prey location. In14, the authors proposed an FS method based on a convolutional neural network (CNN) to detect pneumonia from lung X-ray images. https://doi.org/10.1016/j.future.2020.03.055 (2020). Purpose The study aimed at developing an AI . This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). Sohail, A. S.M., Bhattacharya, P., Mudur, S.P. & Krishnamurthy, S. Classification of ultrasound medical images using distance based feature selection and fuzzy-svm. 2 (right). Faramarzi et al.37 divided the agents for two halves and formulated Eqs. Zhang, N., Ruan, S., Lebonvallet, S., Liao, Q. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). Nguyen, L.D., Lin, D., Lin, Z. Improving the ranking quality of medical image retrieval using a genetic feature selection method. (22) can be written as follows: By using the discrete form of GL definition of Eq. They used K-Nearest Neighbor (kNN) to classify x-ray images collected from Montgomery dataset, and it showed good performances. Imaging 35, 144157 (2015). If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. In Table4, for Dataset 1, the proposed FO-MPA approach achieved the highest accuracy in the best and mean measures, as it reached 98.7%, and 97.2% of correctly classified samples, respectively. In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). Afzali, A., Mofrad, F.B. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. While55 used different CNN structures. We have used RMSprop optimizer for weight updates, cross entropy loss function and selected learning rate as 0.0001. The whale optimization algorithm. The main purpose of Conv. The symbol \(R_B\) refers to Brownian motion. Faramarzi, A., Heidarinejad, M., Mirjalili, S. & Gandomi, A. H. Marine predators algorithm: a nature-inspired metaheuristic. In this paper, a new ML-method proposed to classify the chest x-ray images into two classes, COVID-19 patient or non-COVID-19 person. The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). As seen in Table3, on Dataset 1, the FO-MPA outperformed the other algorithms in the mean of fitness value as it achieved the smallest average fitness function value followed by SMA, HHO, HGSO, SCA, BGWO, MPA, and BPSO, respectively whereas, the SGA and WOA showed the worst results. }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! In addition, the good results achieved by the FO-MPA against other algorithms can be seen as an advantage of FO-MPA, where a balancing between exploration and exploitation stages and escaping from local optima were achieved. Da Silva, S. F., Ribeiro, M. X., Neto, Jd. Therefore, in this paper, we propose a hybrid classification approach of COVID-19. Chollet, F. Xception: Deep learning with depthwise separable convolutions. arXiv preprint arXiv:1409.1556 (2014). 2 (left). In general, feature selection (FS) methods are widely employed in various applications of medical imaging applications. Diagnosis of parkinsons disease with a hybrid feature selection algorithm based on a discrete artificial bee colony. The announcement confirmed that from May 8, following Japan's Golden Week holiday period, COVID-19 will be officially downgraded to Class 5, putting the virus on the same classification level as seasonal influenza. Med. Although outbreaks of SARS and MERS had confirmed human to human transmission3, they had not the same spread speed and infection power of the new coronavirus (COVID-19). One of the main disadvantages of our approach is that its built basically within two different environments. 78, 2091320933 (2019). Furthermore, the proposed GRAY+GRAY_HE+GRAY_CLAHE image representation was evaluated on two different datasets, SARS-CoV-2 CT-Scan and New_Data_CoV2, where it was found to be superior to RGB . (1): where \(O_k\) and \(E_k\) refer to the actual and the expected feature value, respectively. Extensive comparisons had been implemented to compare the FO-MPA with several feature selection algorithms, including SMA, HHO, HGSO, WOA, SCA, bGWO, SGA, BPSO, besides the classic MPA. what medical images are commonly used for COVID-19 classification and what are the methods for COVID-19 classification. Also, As seen in Fig. (20), \(FAD=0.2\), and W is a binary solution (0 or 1) that corresponded to random solutions. }, \end{aligned}$$, $$\begin{aligned} D^{\delta }[U(t)]=\frac{1}{T^\delta }\sum _{k=0}^{m} \frac{(-1)^k\Gamma (\delta +1)U(t-kT)}{\Gamma (k+1)\Gamma (\delta -k+1)} \end{aligned}$$, $$\begin{aligned} D^1[U(t)]=U(t+1)-U(t) \end{aligned}$$, $$\begin{aligned} U=Lower+rand_1\times (Upper - Lower ) \end{aligned}$$, $$\begin{aligned} Elite=\left[ \begin{array}{cccc} U_{11}^1&{}U_{12}^1&{}\ldots &{}U_{1d}^1\\ U_{21}^1&{}U_{22}^1&{}\ldots &{}U_{2d}^1\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}^1&{}U_{n2}^1&{}\ldots &{}U_{nd}^1\\ \end{array}\right] , \, U=\left[ \begin{array}{cccc} U_{11}&{}U_{12}&{}\ldots &{}U_{1d}\\ U_{21}&{}U_{22}&{}\ldots &{}U_{2d}\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}&{}U_{n2}&{}\ldots &{}U_{nd}\\ \end{array}\right] , \, \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (Elite_i-R_B\bigotimes U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} U_i+P.R\bigotimes S_i \end{aligned}$$, \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\), $$\begin{aligned} S_i&= {} R_L \bigotimes (Elite_i-R_L\bigotimes U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (R_B \bigotimes Elite_i- U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}} \right) ^{\left(2\frac{t}{t_{max}}\right) } \end{aligned}$$, $$\begin{aligned} S_i&= {} R_L \bigotimes (R_L \bigotimes Elite_i- U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}}\right) ^{\left(2\frac{t}{t_{max}} \right) } \end{aligned}$$, $$\begin{aligned} U_i=\left\{ \begin{array}{ll} U_i+CF [U_{min}+R \bigotimes (U_{max}-U_{min})]\bigotimes W &{} r_5 < FAD \\ U_i+[FAD(1-r)+r](U_{r1}-U_{r2}) &{} r_5 > FAD\\ \end{array}\right. 115, 256269 (2011). A combination of fractional-order and marine predators algorithm (FO-MPA) is considered an integration among a robust tool in mathematics named fractional-order calculus (FO). Faramarzi et al.37 implement this feature via saving the previous best solutions of a prior iteration, and compared with the current ones; the solutions are modified based on the best one during the comparison stage. For general case based on the FC definition, the Eq. Evaluate the proposed approach by performing extensive comparisons to several state-of-art feature selection algorithms, most recent CNN architectures and most recent relevant works and existing classification methods of COVID-19 images. Metric learning Metric learning can create a space in which image features within the. Two real datasets about COVID-19 patients are studied in this paper. MPA simulates the main aim for most creatures that is searching for their foods, where a predator contiguously searches for food as well as the prey. Propose similarity regularization for improving C. arXiv preprint arXiv:2003.13815 (2020). The shape of the output from the Inception is (5, 5, 2048), which represents a feature vector of size 51200. This study presents an investigation on 16 pretrained CNNs for classification of COVID-19 using a large public database of CT scans collected from COVID-19 patients and non-COVID-19 subjects. Can ai help in screening viral and covid-19 pneumonia? The evaluation showed that the RDFS improved SVM robustness against reconstruction kernel and slice thickness. For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. It achieves a Dice score of 0.9923 for segmentation, and classification accuracies of 0. 22, 573577 (2014). In 2018 IEEE International Symposium on Circuits and Systems (ISCAS), 15 (IEEE, 2018). New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. Negative COVID-19 images were collected from another Chest X-ray Kaggle published dataset43. 0.9875 and 0.9961 under binary and multi class classifications respectively. CAS It based on using a deep convolutional neural network (Inception) for extracting features from COVID-19 images, then filtering the resulting features using Marine Predators Algorithm (MPA), enhanced by fractional-order calculus(FO). Image segmentation is a necessary image processing task that applied to discriminate region of interests (ROIs) from the area of outsides. A. Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. Detecting COVID-19 at an early stage is essential to reduce the mortality risk of the patients. Performance analysis of neural networks for classification of medical images with wavelets as a feature extractor. Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. kharrat and Mahmoud32proposed an FS method based on a hybrid of Simulated Annealing (SA) and GA to classify brain tumors using MRI. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. Harikumar, R. & Vinoth Kumar, B. Support Syst. In57, ResNet-50 CNN has been applied after applying horizontal flipping, random rotation, random zooming, random lighting, and random wrapping on raw images. J. Med. (22) can be written as follows: By taking into account the early mentioned relation in Eq. Google Scholar. The results indicate that all CNN-based architectures outperform the ViT-based architecture in the binary classification of COVID-19 using CT images. Comparison with other previous works using accuracy measure. volume10, Articlenumber:15364 (2020) . 41, 923 (2019). Syst. \(r_1\) and \(r_2\) are the random index of the prey. The dataset consists of 21,165 chest X-ray (CXR) COVID-19 images distributed on four categories which are COVID19, lung opacity, viral pneumonia, and NORMAL (Non-COVID). However, the modern name is tenggiling.In Javanese it is terenggiling; and in the Philippine languages, it is goling, tanggiling, or balintong (with the same meaning).. However, using medical imaging, chest CT, and chest X-ray scan can play a critical role in COVID-19 diagnosis. IEEE Trans. From Fig. Stage 2 has been executed in the second third of the total number of iterations when \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\). As seen in Fig. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. Figure6 shows a comparison between our FO-MPA approach and other CNN architectures. For each decision tree, node importance is calculated using Gini importance, Eq. Pool layers are used mainly to reduce the inputs size, which accelerates the computation as well. However, the proposed FO-MPA approach has an advantage in performance compared to other works. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of . COVID-19 is the most transmissible disease, caused by the SARS-CoV-2 virus that severely infects the lungs and the upper respiratory tract of the human body.This virus badly affected the lives and wellness of millions of people worldwide and spread widely. To further analyze the proposed algorithm, we evaluate the selected features by FO-MPA by performing classification. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. Donahue, J. et al. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. Comput. EMRes-50 model . Objective: Lung image classification-assisted diagnosis has a large application market. the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in He, K., Zhang, X., Ren, S. & Sun, J. Whereas, FO-MPA, MPA, HGSO, and WOA showed similar STD results. \end{aligned} \end{aligned}$$, $$\begin{aligned} \begin{aligned} U_{i}(t+1)&= \frac{1}{1!} Comput. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. (2) calculated two child nodes. (2) To extract various textural features using the GLCM algorithm. SMA is on the second place, While HGSO, SCA, and HHO came in the third to fifth place, respectively. To evaluate the performance of the proposed model, we computed the average of both best values and the worst values (Max) as well as STD and computational time for selecting features. The proposed cascaded system is proposed to segment the lung, detect, localize, and quantify COVID-19 infections from computed tomography images, which can reliably localize infections of various shapes and sizes, especially small infection regions, which are rarely considered in recent studies. Li, S., Chen, H., Wang, M., Heidari, A. Al-qaness, M. A., Ewees, A. Li, H. etal. Then the best solutions are reached which determine the optimal/relevant features that should be used to address the desired output via several performance measures. Heidari, A. Scientific Reports Volume 10, Issue 1, Pages - Publisher. Math. For the special case of \(\delta = 1\), the definition of Eq. Key Definitions. Computed tomography (CT) and magnetic resonance imaging (MRI) represent valuable input to AI algorithms, scanning human body sections for the sake of diagnosis. chest X-ray images into three classes of COVID-19, normal chest X-ray and other lung diseases. As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. Imag. You have a passion for computer science and you are driven to make a difference in the research community? https://keras.io (2015). Mobilenets: Efficient convolutional neural networks for mobile vision applications. Cancer 48, 441446 (2012). Shi, H., Li, H., Zhang, D., Cheng, C. & Cao, X. Hence, it was discovered that the VGG-16 based DTL model classified COVID-19 better than the VGG-19 based DTL model. Accordingly, the prey position is upgraded based the following equations. Litjens, G. et al. Wish you all a very happy new year ! The lowest accuracy was obtained by HGSO in both measures. 517 PDF Ensemble of Patches for COVID-19 X-Ray Image Classification Thiago Chen, G. Oliveira, Z. Dias Medicine Methods: We employed a public dataset acquired from 20 COVID-19 patients, which . Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. In COVID19 triage, DB-YNet is a promising tool to assist physicians in the early identification of COVID19 infected patients for quick clinical interventions. The \(\delta\) symbol refers to the derivative order coefficient. Its structure is designed based on experts' knowledge and real medical process. Our proposed approach is called Inception Fractional-order Marine Predators Algorithm (IFM), where we combine Inception (I) with Fractional-order Marine Predators Algorithm (FO-MPA). The combination of Conv. Fractional-order calculus (FC) gains the interest of many researchers in different fields not only in the modeling sectors but also in developing the optimization algorithms. They shared some parameters, such as the total number of iterations and the number of agents which were set to 20 and 15, respectively. Syst. Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. In ancient India, according to Aelian, it was . Deep-learning artificial intelligent (AI) methods have the potential to help improve diagnostic efficiency and accuracy for reading portable CXRs. Therefore, reducing the size of the feature from about 51 K as extracted by deep neural networks (Inception) to be 128.5 and 86 in dataset 1 and dataset 2, respectively, after applying FO-MPA algorithm while increasing the general performance can be considered as a good achievement as a machine learning goal. & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. Automatic CNN-based Chest X-Ray (CXR) image classification for detecting Covid-19 attracted so much attention. 69, 4661 (2014). 2020-09-21 . A. et al. (24). contributed to preparing results and the final figures. Syst. Imaging Syst. Google Research, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, Blog (2017). This algorithm is tested over a global optimization problem. The symbol \(r\in [0,1]\) represents a random number. Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. For example, as our input image has the shape \(224 \times 224 \times 3\), Nasnet26 produces 487 K features, Resnet25 and Xception29 produce about 100 K features and Mobilenet27 produces 50 K features, while FO-MPA produces 130 and 86 features for both dataset1 and dataset 2, respectively. The second one is based on Matlab, where the feature selection part (FO-MPA algorithm) was performed. The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. Layers are applied to extract different types of features such as edges, texture, colors, and high-lighted patterns from the images. A deep feature learning model for pneumonia detection applying a combination of mRMR feature selection and machine learning models. Article Med. Experimental results have shown that the proposed Fuzzy Gabor-CNN algorithm attains highest accuracy, Precision, Recall and F1-score when compared to existing feature extraction and classification techniques. Howard, A.G. etal. arXiv preprint arXiv:1704.04861 (2017). Apostolopoulos, I. D. & Mpesiana, T. A. Covid-19: automatic detection from x-ray images utilizing transfer learning with convolutional neural networks. Sci. Scientific Reports (Sci Rep) Correspondence to In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition12511258 (2017). \end{aligned}$$, $$\begin{aligned} U_i(t+1)-U_i(t)=P.R\bigotimes S_i \end{aligned}$$, $$\begin{aligned} D ^{\delta } \left[ U_{i}(t+1)\right] =P.R\bigotimes S_i \end{aligned}$$, $$D^{\delta } \left[ {U_{i} (t + 1)} \right] = U_{i} (t + 1) + \sum\limits_{{k = 1}}^{m} {\frac{{( - 1)^{k} \Gamma (\delta + 1)U_{i} (t + 1 - k)}}{{\Gamma (k + 1)\Gamma (\delta - k + 1)}}} = P \cdot R \otimes S_{i} .$$, $$\begin{aligned} \begin{aligned} U(t+1)_{i}= - \sum _{k=1}^{m} \frac{(-1)^k\Gamma (\delta +1)U_{i}(t+1-k)}{\Gamma (k+1)\Gamma (\delta -k+1)} + P.R\bigotimes S_i.